Proposed topics of doctoral dissertations:

 

TECHNICAL INFORMATICS AND TELECOMUNICATIONS

 

 

DEEP LEARNING

 
 No  Topic  Supervisor  Institute
1 Effective Classifiers of biomedical signals derived from the information theory

prof. dr hab. Janusz Szczepański

dr inż. Agnieszka Pręgowska 

IPPT PAN 
2

Transmission efficiency and reliability in neural networks inspired by brain architectures. Information Theory approach

prof. dr hab. Janusz Szczepański

dr inż. Agnieszka Pręgowska 

IPPT PAN
3

Secure and reliable deep neural networks

dr hab. inż. Paweł Morawiecki

IPI PAN
4

Modeling and analysis of information flow in on-line virtual info-sphere with elements of web mining, text mining, big data, sentiment analysis and deep learning

dr hab. Marcin Sydow

IPI PAN
5

Image Semantic Segmentation Based on Deep Neural Networks

dr hab. Maria Ganzha,

dr hab. Marcin Paprzycki,

dr inż. Tatiana Jaworska

IBS PAN

 

 

BIOINFORMATICS AND RELATED ISSUES 

 
 No  Topic  Supervisor  Institute
6 Targeting biological time scales in molecular simulation for the study of protein complexes: The stability of SARS-CoV-2

prof. Tomasz Lipniacki,

dr Adolfo Poma

IPPT PAN 
7

Computational intelligence methods for change point detection in medical processes 

dr Katarzyna Kaczmarek-Majer,

prof. dr hab. inż. Olgierd Hryniewicz

 IBS PAN
8

Deciphering biochemical signallng by means of information theory

dr hab. Michał Komorowski 

IPPT PAN
9

Deciphering of biochemical signaling with systems biology and bioinformatics approaches

dr hab. Michał Komorowski 

IPPT PAN
10 The structure of aquatic food webs – analysis of weighted empirical networks

prof. Zbigniew Nahorski

dr Mateusz Iskrzyński

IBS PAN
11 Mining multifaceted information on the performance of metaheuristics with use of parametrized benchmarks

prof. Olgierd Hryniewicz

dr Karol Opara

IBS PAN

 


ULTRASONOGRAPHY 

 
 No  Topic  Supervisor  Institute
12 3D ultrasound imaging technology for the next generation portable scanners

dr hab. Jurij Tasinkiewicz,

dr Marcin Lewandowski

IPPT PAN 
13

Advanced processing of Full-Matrix Capture datasets in ultrasound non-destructive testing

prof. dr hab. inż. Zbigniew Kowalewski,

dr Marcin Lewandowski

IPPT PAN
14

Ultrasound differential method to evaluate the non-linear tissues parameters

prof. dr hab. Andrzej Nowicki

IPPT PAN
15

Development and optimization of effective algorithms for visualization of ultrasonic signals

prof. dr hab. Jerzy Litniewski,

dr Norbert Żołek

IPPT PAN
16

Development of methods for assessing tissue cancer changes based on ultrasound signals

prof. dr hab. Jerzy Litniewski,

dr Norbert Żołek

IPPT PAN
17

Quantitative ultrasound imaging with thermal contrasting

prof. dr hab. Jerzy Litniewski

dr Piotr Karwat

IPPT PAN

 


MACHINE LEARNING

 
 No  Topic  Supervisor  Institute
18

Advances in Positive Unlabelled data modeling

prof. dr hab. Jan Mielniczuk

IPI PAN
19

The use of machine learning methods to detect mutations in DNA sequences and changes in epigenetic signals important for the regulation of gene expression in selected diseases

dr Michał Dąbrowski IPI PAN
20

Adversarial examples in deep neural networks 

dr hab. inż. Paweł Morawiecki

IPI PAN
21

Towards Semantic Measures of Information Content - Integrating LinkGraph with Seminstructured Textual Information

prof. dr hab. Mieczysław Kłopotek

IPI PAN
22

Interaction Information and its usage in Genome Wide Interaction Studies

prof. dr hab. Jan Mielniczuk

IPI PAN
23

Learning to rank for uplift modeling and heterogeneous treatment effect estimation

dr hab. inż. Szymon Jaroszewicz 

IPI PAN
24

Verification of Socio-Technical Models of Multi-Agent Systems and E-Voting Protocols

dr hab. Wojciech Jamroga,

prof. dr hab. inż. Wojciech Penczek

IPI PAN
25

Next Generation Internet of Things

dr hab. Maria Ganzha,

dr hab. Marcin Paprzycki,

dr Katarzyna Wasielewska-Michniewska,

dr Wiesław Pawłowski

IBS PAN
26

Semantic technologies and machine learning in development of intelligent systems

dr hab. Maria Ganzha,

dr hab. Marcin Paprzycki,

dr Katarzyna Wasielewska-Michniewska,

dr Wiesław Pawłowski

IBS PAN
27

Visual Knowledge Representation

dr inż. Tatiana Jaworska

IBS PAN
28

Semantic Similarity in Content-Base Image Retrieval (CBIR)

dr inż. Tatiana Jaworska

 IBS PAN
29

Machine learning methods for identification of effective drug combinations in immuno-oncology 

dr hab. Michał Komorowski

IPPT PAN
30

Modern machine learning methods in medical imaging

dr hab. Joanna Kołodziej,

dr inż. Konrad Ciecierski

NASK-PIB
31 Semantic Similarity in Content-Base Image Retrieval (CBIR) 

prof Maria Ganzha

prof Marcin Paprzycki

Dr.  Tatiana Jaworska

IBS PAN
32 Semantic technologies and machine learning in development of intelligent systems

dr hab. Maria Ganzha

dr hab. Marcin Paprzycki

dr Katarzyna Wasielewska-Michniewska

dr Wiesław Pawłowski

IBS PAN
33 Next Generation Internet of Things based on post-cloud Ecosystems

dr hab. Maria Ganzha

dr hab. Marcin Paprzycki

dr Katarzyna Wasielewska-Michniewska

dr Wiesław Pawłowski

IBS PAN
34 Learning with imperfect teacher with application to GAN-based classification of partially labelled images prof. dr hab. inż. Andrzej Pacut NASK-PIB

 

 


FINANCIAL MATHEMATICS

 
 No  Topic  Supervisor  Institute
35 Pricing financial derivatives on the Bitcoin market

dr hab. Piotr Nowak

IBS PAN
36

Strong law of large numbers for intuitionistic fuzzy random variables

dr hab. Piotr Nowak   

IBS PAN
37 Pricing European options on the Bitcoin market prof. Piotr Nowak IBS PAN
38 Generalized versions of the strong law of large numbers for intuitionistic fuzzy random variables prof. Piotr Nowak IBS PAN
39 Modelling of imprecise rare catastrophic events in insurance system prof Maciej Romaniuk IBS PAN

 

 


OPTIMIZATION, STATISTICAL DATA ANALYSIS

 
 No  Topic  Supervisor  Institute
40 The structure of aquatic food webs – statistical analysis of a broad set of
weighted empirical networks.

prof. dr hab. inż. Zbigniew Nahorski,

dr Mateusz Iskrzyński

IBS PAN
41

Mining multifaceted information on the performance of metaheuristics with use of parametrized benchmarks

prof. dr hab. inż. Olgierd Hryniewicz,

dr Karol Opara

IBS PAN
42

Autonomous assortment management and recommendation algorithms for the large-scale retail purposes using advanced natural language processing techniques and transferable demand models

dr hab. inż. Szymon Łukasik,

dr inż. Anna Wróblewska  

IBS PAN
43

Mixed-Integer Linear and Nonlinear Programming Methods for Energy Aware Traffic Control in Clouds and Internet of Things Systems

dr hab. inż. Andrzej Karbowski

NASK-PIB
44 Modeling uncertainty in sensor-based monitoring of bipolar disorder

Prof. dr hab. inż. Olgierd Hryniewicz

dr Katarzyna Kaczmarek-Majer

IBS PAN
45 Spatial correlations in computational intelligence methods for the air pollution modeling

Prof. dr hab. inż. Zbigniew Nahorski

dr Katarzyna Kaczmarek-Majer

IBS PAN
46 The reverse clustering paradigm in the partially supervised classification of Big Data

prof Jan W. Owsiński

dr Jarosław Stańczak

IBS PAN
47 Fuzzy approaches in simulation of malfunctions of elements of networks prof Maciej Romaniuk IBS PAN
48 Numerical methods in optimal control and shape optimisation of coupled problems with in-compressible flows

prof. dr hab. inż. Jan Sokołowski

dr Katarzyna Szulc

IBS PAN

 

 


MATERIAL TESTING

 
 No  Topic  Supervisor  Institute
49 The use of indentation test to estimate fatigue damage of structural elements under cyclic multiaxial loads

dr hab. Stanisław Kucharski

IPPT PAN
50

Interaction of plastic deformation mechanisms in single crystals at micro and meso-scale

dr hab. Stanisław Kucharski

IPPT PAN

 

 

COMPUTATIONAL MECHANICS, NUMERICAL METHODS

 
 No  Topic  Supervisor  Institute
51 Dynamic analysis of fragmentation of multi-phase composites

dr hab. inż. Eligiusz Postek

IPPT PAN
52 Stress evaluation in growing tissue

dr hab. inż. Eligiusz Postek

IPPT PAN

 

 

 

MEDICAL SCIENCES AND BIOMEDICAL ENGINEERING

 

BIOMEDICAL OPTICS

 
 No  Topic  Supervisor  Institute
1 Assessment of brain physiological parameters using invasive near infrared spectroscopy technique

prof. dr hab. inż. Adam Liebert,

dr inż. Piotr Sawosz

IBIB PAN
2

Arterial spin labeling, diffuse correlation spectroscopy, time resolved near infrared spectroscopy - study on methodology of the brain cortex perfusion assessment

prof. dr hab. inż. Adam Liebert,

prof. dr hab. inż. Piotr Bogorodzki,

dr Michał Kacprzak

IBIB PAN
3

Superimposing multi-frequency measurements into a distribution of time of flight of photons

prof. dr hab. inż. Adam Liebert,

dr inż. Stanislaw Wojtkiewicz

IBIB PAN
4

‘Imaging with the speed of light’ - a CCD camera working in the multi-frequency domain providing picosecond temporal resolution.

prof. dr hab. inż. Adam Liebert,

dr inż. Stanislaw Wojtkiewicz

IBIB PAN
5

Encapsulated ICG-enhanced spectral time-resolved near-infrared spectroscopy for brain hemodynamic studies

prof. dr hab. inż. Adam Liebert,

dr inż. Anna Gerega

IBIB PAN

 

 

MODELING AND THERAPEUTIC APPLICATIONS OF BIOMEDICAL/PHYSIOLOGICAL PHENOMENA 

 
 No  Topic  Supervisor  Institute
6 The role of interstitium and its properties in the tissue transport processes: modeling, prediction and optimization of selected therapies

prof. dr hab. Jacek Waniewski,

dr Joanna Stachowska-Piętka

IBIB PAN
7

Optimization of vasopressor dose in severe traumatic brain injuries using pulse-wave propagation modeling

dr hab. Jan Poleszczuk

IBIB PAN
8

Systems biology models of propagation and eradication viral infections

prof. dr hab. Tomasz Lipniacki,

dr Joanna Jaruszewicz-Błońska

IPPT PAN
9

Synchronized registration of instantaneous values of chosen physiological parameters during therapeutic thoracentesis, and their mathematical and physiological analysis

dr hab. inż. Tomasz Gólczewski,

dr inż. Krzysztof Zieliński

IBIB PAN
10

Nanoscaffolds for biosystems supporting biological processes for biomedical purposes

prof. dr hab. inż. Ludomira Granicka,

dr Anna Grzeczkowicz

IBIB PAN
11 Automatic calculation of wound surface area using artificial intelligence (AI) methods and convolutional neural networks (CNN)

dr hab. Piotr Foltynski

IBIB PAN
12 Development of an incentive system to support patients with diabetic foot ulcerations

dr hab. Piotr Foltynski

IBIB PAN
13

Cytotoxicity of melanin nanoparticles as a tool for melanoma detection and therapy

prof. Michal Giersig

IPPT PAN
14

Development of a differential mechanical ventilation system for shared ventilation in a case of shortage of devices for lungs function support

prof. dr hab. inż. Marek Darowski

dr. Krzysztof Zieliński

IBIB PAN
15 Optimisation of peritoneal dialysis by modelling of water and solute transport

dr hab. J. Poleszczuk

dr J. Stachowska-Piętka

IBIB PAN
16 Optimisation of intraperitoneal chemotherapy by modelling of water and solute transport

dr hab. J. Poleszczuk

dr J. Stachowska-Piętka

IBIB PAN
17 Optimizing hemodialysis treatment by computational methods

dr. Malgorzata Debowska

dr Mauro Pietribiasi

IBIB PAN

 

CELLS AND MOLECULAR PROCESSES ANALYSIS

 
 No  Topic  Supervisor  Institute
18 3-D delineation of cell’s nuclei in WSI Z-stack sequences for computer aided pathology

dr hab. Anna Korzyńska

IBIB PAN
19

Deciphering the effect of PGC1a on mitochondrial biogenesis and neural differentiation during early development of human cerebral organoids

prof. dr hab. Leonora Bużańska

IMDiK PAN

 

 

 BIOFLUIDS ANALYSIS

 
 No  Topic  Supervisor  Institute
20 Analysis of metabolic profiles of biofluids in selected diseases

dr hab. Beata Toczyłowska,

dr Igor Zukov,

dr n. med. Anna Słowikowska

IBIB PAN
21

Semi-automatic NMR spectra analysis of biofluids and tissue extracts for metabolomics

dr hab. Beata Toczyłowska

IBIB PAN

 

 

POLYMERS IN REGENERATIVE MEDICINE

 
 No  Topic  Supervisor  Institute
22

Injectable composite hydrogels in the regeneration of cartilage

prof. dr hab. inż. Paweł Sajkiewicz,

dr inż. Dorota-Kołbuk Konieczny

IPPT PAN
23

Injectable polymer hydrogels for the post-infarction myocardium regeneration

prof. dr hab. inż. Paweł Sajkiewicz

IPPT PAN
24

Innovative electrospun membranes for dental applications

 

prof. dr hab. inż. Paweł Sajkiewicz,

dr inż. Dorota-Kołbuk Konieczny

IPPT PAN
25

Development of the three-dimensional (3D) printed matrix loaded with hydrogel for cartilage regeneration 

prof. dr hab. inż. Paweł Sajkiewicz,

dr inż. Dorota-Kołbuk Konieczny

IPPT PAN
26

Mucoadhesive polymeric systems for controlled drug delivery 

prof. dr hab. inż. Paweł Sajkiewicz IPPT PAN
27

Shear-thinning/self-healing hydrogels for cartilage regeneration

prof. dr hab. inż. Paweł Sajkiewicz IPPT PAN
28 Drug delivery systems using electrospun micro-and nanofibers dr hab. inż. Tomasz Kowalczyk IPPT PAN

  

 

DEVELOPMENT METHODS FOR BIOINFORMATICS

 
 No  Topic  Supervisor  Institute
29 Bioinformatics methods in analysis of medical databases

dr hab. inż. Małgorzata Dębowska,

dr inż. Mauro Pietribiasi

IBIB PAN

 

BIOMEDICAL ENGEENERING

 
 No  Topic  Supervisor  Institute
30

Smart hybrid organic-inorganic nanocomposites with multifunctional properties

dr hab Filippo Pierini

 

IPPT PAN

31

Stimuli-responsive drug delivery systems activated by light

dr hab Filippo Pierini IPPT PAN
32

Optimizing Dialysate Bicarbonate Concentration During Hemodialysis by Mathematical ModelingHemodialysis by Mathematical Modeling

dr John Kenneth Leypoldt

prof. dr hab. Jacek Waniewski

IBIB PAN